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    Lap1 leucine rich repeat containing protein 7 lap1 [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 660631, updated on 2-Apr-2025
    Gene symbol
    Lap1
    Gene description
    leucine rich repeat containing protein 7 lap1
    Locus tag
    TcasGA2_TC001631
    See related
    EnsemblRapid:GeneID_660631
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Location:
    chromosome: 10
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 10 NC_087403.1 (1847833..1851515, complement)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LGX NC_007416.3 (1257829..1261303, complement)

    Chromosome 10 - NC_087403.1Genomic Context describing neighboring genes Neighboring gene pro-interleukin-16 Neighboring gene uncharacterized LOC103314876 Neighboring gene mid1-interacting protein 1-B Neighboring gene leucine-rich repeats and immunoglobulin-like domains protein 2

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in embryo development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter receptor transport postsynaptic membrane to endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in receptor clustering IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    protein lap1
    Names
    AUGUSTUS-3.0.2_01631
    GLEAN_01631
    Protein lap1-like Protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087403.1 Reference icTriCast1.1 Primary Assembly

      Range
      1847833..1851515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_966847.4 → XP_971940.1  protein lap1

      See identical proteins and their annotated locations for XP_971940.1

      UniProtKB/TrEMBL
      D6W6L1
      Related
      XP_971940.1, XM_966847.4
      Conserved Domains (5) summary
      cd00116
      Location:11 → 225
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      cd00136
      Location:616 → 686
      PDZ; PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. ...
      sd00033
      Location:111 → 133
      LRR_RI; leucine-rich repeat [structural motif]
      pfam03449
      Location:465 → 529
      GreA_GreB_N; Transcription elongation factor, N-terminal
      pfam13855
      Location:247 → 303
      LRR_8; Leucine rich repeat
    Nucleotide Protein Strain
    Heading Accession and Version

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