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    LOC100120723 probable helicase senataxin [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100120723, updated on 14-Dec-2023

    Summary

    Gene symbol
    LOC100120723
    Gene description
    probable helicase senataxin
    See related
    NASONIABASE:NV16681
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
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    Genomic context

    See LOC100120723 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (4958745..4970432)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279627.1 (8167877..8178343, complement)

    Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene alpha-(1,3)-fucosyltransferase 7-like Neighboring gene uncharacterized LOC100120707 Neighboring gene uncharacterized LOC100120744 Neighboring gene MAP kinase-activated protein kinase 2 Neighboring gene ragulator complex protein LAMTOR2 homolog Neighboring gene BTB/POZ domain-containing protein KCTD5

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables transcription termination site sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in termination of RNA polymerase II transcription IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    probable helicase senataxin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045759.1 Reference Nvit_psr_1.1

      Range
      4958745..4970432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031926524.2XP_031782384.1  probable helicase senataxin isoform X3

      UniProtKB/TrEMBL
      A0A7M7Q6G5
      Conserved Domains (5) summary
      COG1112
      Location:10301605
      DNA2; Superfamily I DNA and/or RNA helicase [Replication, recombination and repair]
      PRK08581
      Location:454667
      PRK08581; amidase domain-containing protein
      pfam00498
      Location:2789
      FHA; FHA domain
      pfam13086
      Location:11091371
      AAA_11; AAA domain
      NF033845
      Location:533812
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
    2. XM_031926522.2XP_031782382.1  probable helicase senataxin isoform X1

      UniProtKB/TrEMBL
      A0A7M7QAC5
      Conserved Domains (5) summary
      COG1112
      Location:10301605
      DNA2; Superfamily I DNA and/or RNA helicase [Replication, recombination and repair]
      PRK08581
      Location:454667
      PRK08581; amidase domain-containing protein
      pfam00498
      Location:2789
      FHA; FHA domain
      pfam13086
      Location:11091371
      AAA_11; AAA domain
      NF033845
      Location:533812
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
    3. XM_031926523.2XP_031782383.1  probable helicase senataxin isoform X2

      UniProtKB/TrEMBL
      A0A7M7T8H9
      Conserved Domains (5) summary
      COG1112
      Location:10301605
      DNA2; Superfamily I DNA and/or RNA helicase [Replication, recombination and repair]
      PRK08581
      Location:454667
      PRK08581; amidase domain-containing protein
      pfam00498
      Location:2789
      FHA; FHA domain
      pfam13086
      Location:11091371
      AAA_11; AAA domain
      NF033845
      Location:533812
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB