U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100122056 protein artichoke [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100122056, updated on 12-Aug-2022

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100122056
    Gene description
    protein artichoke
    See related
    NASONIABASE:NV16406
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Parasitoida; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100122056 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (3608524..3656249, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279650.1 (3608524..3656249, complement)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-27A Neighboring gene molybdenum cofactor sulfurase 3 Neighboring gene uncharacterized LOC100122087 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene protein artichoke Neighboring gene alcohol dehydrogenase Neighboring gene alpha-glucosidase-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein artichoke

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      3608524..3656249 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031931793.1 → XP_031787653.1  protein artichoke

      UniProtKB/TrEMBL
      A0A7M7QHF9
      Conserved Domains (7) summary
      smart00060
      Location:1196 → 1264
      FN3; Fibronectin type 3 domain
      PLN00113
      Location:569 → 1102
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:292 → 315
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13306
      Location:121 → 215
      LRR_5; Leucine rich repeats (6 copies)
      pfam13855
      Location:292 → 350
      LRR_8; Leucine rich repeat
      cd21340
      Location:345 → 515
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl15307
      Location:1125 → 1192
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

    2. XM_001605609.5 → XP_001605659.1  protein artichoke

      UniProtKB/TrEMBL
      A0A7M7QHF9, K7J4W3
      Conserved Domains (7) summary
      smart00060
      Location:1196 → 1264
      FN3; Fibronectin type 3 domain
      PLN00113
      Location:569 → 1102
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00033
      Location:292 → 315
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13306
      Location:121 → 215
      LRR_5; Leucine rich repeats (6 copies)
      pfam13855
      Location:292 → 350
      LRR_8; Leucine rich repeat
      cd21340
      Location:345 → 515
      PPP1R42; protein phosphatase 1 regulatory subunit 42
      cl15307
      Location:1125 → 1192
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases