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    LOC100121874 protein crooked neck [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100121874, updated on 22-May-2024

    Summary

    Gene symbol
    LOC100121874
    Gene description
    protein crooked neck
    See related
    NASONIABASE:NV14445
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
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    Genomic context

    See LOC100121874 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (1693276..1696132)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279627.1 (11441299..11444009, complement)

    Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene putative ATP-dependent DNA helicase Q1 Neighboring gene keratin-associated protein 5-1 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene uncharacterized LOC100677951 Neighboring gene WD repeat-containing protein 89

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal complex assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of Prp19 complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U2-type catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of post-mRNA release spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045759.1 Reference Nvit_psr_1.1

      Range
      1693276..1696132
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001605430.6XP_001605480.1  protein crooked neck

      See identical proteins and their annotated locations for XP_001605480.1

      UniProtKB/TrEMBL
      A0A7M7G7G4
      Conserved Domains (4) summary
      pfam02184
      Location:191221
      HAT; HAT (Half-A-TPR) repeat
      smart00386
      Location:90122
      HAT; HAT (Half-A-TPR) repeats
      COG5107
      Location:79539
      RNA14; Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification]
      sd00006
      Location:78104
      TPR; TPR repeat [structural motif]