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    LOC100123741 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100123741, updated on 10-Oct-2024
    Gene symbol
    LOC100123741
    Gene description
    probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial
    See related
    NASONIABASE:NV12866
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
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    See LOC100123741 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 4 Unlocalized Scaffold NC_045760.1 (28685735..28690865, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 4 Unlocalized Scaffold NW_022279647.1 (4143116..4148246, complement)

    Chromosome 4 - NC_045760.1Genomic Context describing neighboring genes Neighboring gene protein PFC0760c Neighboring gene NADH dehydrogenase ubiquinone Neighboring gene Sirtuin 2 Neighboring gene poly(U)-specific endoribonuclease homolog Neighboring gene uncharacterized LOC103317758

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxoglutarate dehydrogenase (succinyl-transferring) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thiamine pyrophosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045760.1 Reference Nvit_psr_1.1

      Range
      28685735..28690865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008216739.3 → XP_008214961.1  probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A7M7HBB3
      Conserved Domains (4) summary
      PRK09404
      Location:38 → 926
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
      cd02016
      Location:190 → 460
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:583 → 785
      Transket_pyr; Transketolase, pyrimidine binding domain
      pfam16870
      Location:793 → 930
      OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal

    2. XM_001607394.5 → XP_001607444.2  probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A7M7G8R4
      Conserved Domains (4) summary
      PRK09404
      Location:38 → 923
      sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
      cd02016
      Location:190 → 460
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:580 → 782
      Transket_pyr; Transketolase, pyrimidine binding domain
      pfam16870
      Location:790 → 927
      OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal
    Nucleotide Protein Strain
    Heading Accession and Version

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