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    uif sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein uif [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100122612, updated on 10-Oct-2024
    Gene symbol
    uif
    Gene description
    sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein uif
    See related
    NASONIABASE:NV12534
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
    NEW
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    See uif in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 3 Unlocalized Scaffold NC_045759.1 (16790550..16834860, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 3 Unlocalized Scaffold NW_022279634.1 (7925253..7969564)

    Chromosome 3 - NC_045759.1Genomic Context describing neighboring genes Neighboring gene xanthine dehydrogenase Neighboring gene uncharacterized LOC100122625 Neighboring gene uncharacterized LOC116416985 Neighboring gene trypsin-1 Neighboring gene serine protease nudel-like

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables Notch binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045759.1 Reference Nvit_psr_1.1

      Range
      16790550..16834860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031927973.2 → XP_031783833.1  sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A7M7Q9I3
      Conserved Domains (12) summary
      cd00033
      Location:1044 → 1100
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00034
      Location:33 → 159
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      smart00179
      Location:784 → 821
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:583 → 782
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:318 → 428
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00054
      Location:2052 → 2088
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00112
      Location:164 → 198
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cl25480
      Location:825 → 969
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
      pfam00008
      Location:2018 → 2048
      EGF; EGF-like domain
      pfam07699
      Location:1855 → 1902
      Ephrin_rec_like; Putative ephrin-receptor like
      cl03620
      Location:2791 → 2870
      DUF5011; Domain of unknown function (DUF5011)
      cl22861
      Location:2573 → 2726
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

    2. XM_031927972.2 → XP_031783832.1  sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A7M7T946
      Conserved Domains (12) summary
      cd00033
      Location:1044 → 1100
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00034
      Location:33 → 159
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      smart00179
      Location:784 → 821
      EGF_CA; Calcium-binding EGF-like domain
      PHA02927
      Location:583 → 782
      PHA02927; secreted complement-binding protein; Provisional
      cd00041
      Location:318 → 428
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
      cd00054
      Location:2052 → 2088
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00112
      Location:164 → 198
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      cl25480
      Location:825 → 969
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
      pfam00008
      Location:2018 → 2048
      EGF; EGF-like domain
      pfam07699
      Location:1855 → 1902
      Ephrin_rec_like; Putative ephrin-receptor like
      cl03620
      Location:2791 → 2870
      DUF5011; Domain of unknown function (DUF5011)
      cl22861
      Location:2573 → 2726
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein Strain
    Heading Accession and Version

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