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    LOC100123260 2-hydroxyacyl-CoA lyase 1 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100123260, updated on 10-May-2024

    Summary

    Gene symbol
    LOC100123260
    Gene description
    2-hydroxyacyl-CoA lyase 1
    See related
    NASONIABASE:NV12355
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
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    Genomic context

    See LOC100123260 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (6294711..6300295)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279650.1 (6294711..6300295)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene venom acid phosphatase Acph-1 Neighboring gene uncharacterized LOC116417648 Neighboring gene arginyl-tRNA--protein transferase 1 Neighboring gene sialin Neighboring gene uncharacterized LOC100678866 Neighboring gene NECAP-like protein CG9132 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit Ost48

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables thiamine pyrophosphate binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid alpha-oxidation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      6294711..6300295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003424469.4XP_003424517.1  2-hydroxyacyl-CoA lyase 1 isoform X2

      UniProtKB/TrEMBL
      A0A7M7GBJ6
      Conserved Domains (4) summary
      PRK09259
      Location:2528
      PRK09259; putative oxalyl-CoA decarboxylase; Validated
      cd02004
      Location:342524
      TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
      pfam00205
      Location:168297
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain
      pfam02776
      Location:2145
      TPP_enzyme_N; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
    2. XM_001606826.6XP_001606876.1  2-hydroxyacyl-CoA lyase 1 isoform X1

      UniProtKB/TrEMBL
      A0A7M7G927
      Conserved Domains (4) summary
      cd07035
      Location:8162
      TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
      PRK09259
      Location:4553
      PRK09259; putative oxalyl-CoA decarboxylase; Validated
      cd02004
      Location:367549
      TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
      pfam00205
      Location:193322
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain