U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Kat60 Katanin 60 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100116925, updated on 10-Oct-2024
    Gene symbol
    Kat60
    Gene description
    Katanin 60
    See related
    NASONIABASE:NV11314
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
    NEW
    Try the new Gene table
    Try the new Transcript table
    See Kat60 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 4 Unlocalized Scaffold NC_045760.1 (4581441..4586197, complement)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 4 Unlocalized Scaffold NW_022279642.1 (4581441..4584073, complement)

    Chromosome 4 - NC_045760.1Genomic Context describing neighboring genes Neighboring gene RNA-binding motif protein, X-linked 2 Neighboring gene ribosomal protein S16 Neighboring gene Arginine methyltransferase 8 Neighboring gene uncharacterized LOC100679656 Neighboring gene Taspase 1 Neighboring gene glycine receptor alpha 1

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule severing ATPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule severing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    katanin p60 ATPase-containing subunit A-like 1

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045760.1 Reference Nvit_psr_1.1

      Range
      4581441..4586197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001601245.6 → XP_001601295.1  katanin p60 ATPase-containing subunit A-like 1

      See identical proteins and their annotated locations for XP_001601295.1

      UniProtKB/TrEMBL
      A0A7M7GBV4
      Conserved Domains (3) summary
      smart00382
      Location:277 → 417
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:281 → 415
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam09336
      Location:480 → 523
      Vps4_C; Vps4 C terminal oligomerization domain
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials