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    B52 serine and arginine rich splicing factor B52 [ Nasonia vitripennis (jewel wasp) ]

    Gene ID: 100113663, updated on 10-Oct-2024
    Gene symbol
    B52
    Gene description
    serine and arginine rich splicing factor B52
    See related
    NASONIABASE:NV10642
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nasonia vitripennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Proctotrupomorpha; Chalcidoidea; Pteromalidae; Pteromalinae; Nasonia
    Orthologs
    fruit fly honey bee all
    NEW
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    See B52 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Nvit_psr_1.1 (GCF_009193385.2) 5 Unlocalized Scaffold NC_045761.1 (27141397..27156468)
    103 previous assembly Nvit_psr_1 (GCF_009193385.1) 5 Unlocalized Scaffold NW_022279649.1 (1112993..1128055, complement)

    Chromosome 5 - NC_045761.1Genomic Context describing neighboring genes Neighboring gene trabid Neighboring gene NADPH-dependent diflavin oxidoreductase 1 Neighboring gene Katazuke Neighboring gene thymosin beta cib Neighboring gene uncharacterized LOC100680106

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Werren JH, et al. Science, 2010 Jan 15. PMID 20075255, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    serine-arginine protein 55

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Nasonia vitripennis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nvit_psr_1.1

    Genomic

    1. NC_045761.1 Reference Nvit_psr_1.1

      Range
      27141397..27156468
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031930928.2 → XP_031786788.1  serine-arginine protein 55 isoform X1

      UniProtKB/TrEMBL
      A0A7M7QID9
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:134 → 205
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    2. XM_031930929.2 → XP_031786789.1  serine-arginine protein 55 isoform X2

      UniProtKB/TrEMBL
      A0A7M7QYR3
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:134 → 204
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    3. XM_008208678.4 → XP_008206900.1  serine-arginine protein 55 isoform X5

      UniProtKB/TrEMBL
      A0A7M7H5C1
      Conserved Domains (3) summary
      COG0724
      Location:2 → 111
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:128 → 199
      RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    4. XM_032600881.1 → XP_032456772.1  serine-arginine protein 55 isoform X16

      UniProtKB/TrEMBL
      A0A7M7R3C6
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:128 → 198
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    5. XM_032600875.1 → XP_032456766.1  serine-arginine protein 55 isoform X9

      UniProtKB/TrEMBL
      A0A7M7R1B6
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:109 → 180
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    6. XM_032600877.1 → XP_032456768.1  serine-arginine protein 55 isoform X13

      UniProtKB/TrEMBL
      A0A7M7R0Z8

    7. XM_001603765.6 → XP_001603815.2  serine-arginine protein 55 isoform X3

      UniProtKB/TrEMBL
      A0A7M7G8Q0
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:133 → 204
      RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    8. XM_032600879.1 → XP_032456770.1  serine-arginine protein 55 isoform X14

      UniProtKB/TrEMBL
      A0A7M7R1I7
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:133 → 203
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    9. XM_008208679.4 → XP_008206901.1  serine-arginine protein 55 isoform X7

      UniProtKB/TrEMBL
      A0A7M7H4T2
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:114 → 185
      RRM2_SRSF4_like; RNA recognition motif 2 in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    10. XM_032600876.1 → XP_032456767.1  serine-arginine protein 55 isoform X11

      UniProtKB/TrEMBL
      A0A7M7QYW9
      Conserved Domains (2) summary
      cd12337
      Location:4 → 73
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:106 → 177
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    11. XM_031930931.2 → XP_031786791.1  serine-arginine protein 55 isoform X4

      UniProtKB/TrEMBL
      A0A7M7QFG8
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:129 → 200
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    12. XM_032600880.1 → XP_032456771.1  serine-arginine protein 55 isoform X15

      UniProtKB/TrEMBL
      A0A7M7R3F8
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:129 → 199
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    13. XM_031930933.2 → XP_031786793.1  serine-arginine protein 55 isoform X8

      UniProtKB/TrEMBL
      A0A7M7QFA3
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:110 → 181
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    14. XM_031930935.2 → XP_031786795.1  serine-arginine protein 55 isoform X12

      UniProtKB/TrEMBL
      A0A7M7QK10
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:102 → 173
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    15. XM_031930930.2 → XP_031786790.1  serine-arginine protein 55 isoform X1

      UniProtKB/TrEMBL
      A0A7M7QID9
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:134 → 205
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    16. XM_032600878.1 → XP_032456769.1  serine-arginine protein 55 isoform X2

      UniProtKB/TrEMBL
      A0A7M7QYR3
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:134 → 204
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    17. XM_031930932.2 → XP_031786792.1  serine-arginine protein 55 isoform X6

      UniProtKB/TrEMBL
      A0A7M7QHC7
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:115 → 186
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    18. XM_031930934.2 → XP_031786794.1  serine-arginine protein 55 isoform X10

      UniProtKB/TrEMBL
      A0A7M7QHI4
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:107 → 178
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    19. XM_032600874.1 → XP_032456765.1  serine-arginine protein 55 isoform X4

      UniProtKB/TrEMBL
      A0A7M7QFG8
      Conserved Domains (2) summary
      cd12337
      Location:5 → 74
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:129 → 200
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    Nucleotide Protein Strain
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