Format

Send to:

Choose Destination
    • Showing Current items.

    Jdp2 Jun dimerization protein 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 116674, updated on 8-Oct-2017
    Official Symbol
    Jdp2provided by RGD
    Official Full Name
    Jun dimerization protein 2provided by RGD
    Primary source
    RGD:621611
    See related
    Ensembl:ENSRNOG00000008224
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Jundm2; Jundp2
    Summary
    transcription factor that represses AP-1-mediated activation [RGD, Feb 2006]
    Orthologs
    Location:
    6q31
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (109464910..109505591)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 6 NC_005105.3 (118780172..118810422)

    Chromosome 6 - NC_005105.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102548751 Neighboring gene Fos proto-oncogene, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC108351275 Neighboring gene basic leucine zipper ATF-like transcription factor Neighboring gene feline leukemia virus subgroup C cellular receptor family, member 2

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016
    Products Interactant Other Gene Complex Source Pubs Description

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_053894.1NP_446346.1  jun dimerization protein 2

      See identical proteins and their annotated locations for NP_446346.1

      Status: PROVISIONAL

      Source sequence(s)
      U53449
      UniProtKB/Swiss-Prot
      Q78E65
      Related
      ENSRNOP00000011339.3, ENSRNOT00000011339.6
      Conserved Domains (3) summary
      cd14686
      Location:82126
      bZIP; coiled coil [structural motif]
      cl21453
      Location:1861
      PKc_like; Protein Kinases, catalytic domain
      cl21462
      Location:82135
      bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005105.4 Reference Rnor_6.0 Primary Assembly

      Range
      109464910..109505591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008764734.2XP_008762956.1  jun dimerization protein 2 isoform X1

      See identical proteins and their annotated locations for XP_008762956.1

      Conserved Domains (2) summary
      cd14722
      Location:231284
      bZIP_ATF3; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
      cl21453
      Location:167210
      PKc_like; Protein Kinases, catalytic domain

    Alternate Rn_Celera

    Genomic

    1. AC_000074.1 Alternate Rn_Celera

      Range
      103098952..103129299
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center