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    CCDC121 coiled-coil domain containing 121 [ Homo sapiens (human) ]

    Gene ID: 79635, updated on 7-May-2017
    Official Symbol
    CCDC121provided by HGNC
    Official Full Name
    coiled-coil domain containing 121provided by HGNC
    Primary source
    HGNC:HGNC:25833
    See related
    Ensembl:ENSG00000176714 Vega:OTTHUMG00000128427
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Orthologs
    Location:
    2p23.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    108 current GRCh38.p7 (GCF_000001405.33) 2 NC_000002.12 (27625638..27629031, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (27848408..27851898, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene chromosome 2 open reading frame 16 Neighboring gene zinc finger protein 512 Neighboring gene GPN-loop GTPase 1 Neighboring gene SPT7 like, STAGA complex gamma subunit Neighboring gene solute carrier family 4 member 1 adaptor protein Neighboring gene long intergenic non-protein coding RNA 1460

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Jun 15 11:32:44 2016

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Clone Names

    • FLJ13646, FLJ43364

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Preferred Names
    coiled-coil domain-containing protein 121

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001142683.2NP_001136155.1  coiled-coil domain-containing protein 121 isoform 2

      See identical proteins and their annotated locations for NP_001136155.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) represents the longer transcript and encodes the longer isoform (2).
      Source sequence(s)
      AK125354, BC066936, BC066969, DB325100, DB452051
      Consensus CDS
      CCDS46247.1
      UniProtKB/Swiss-Prot
      Q6ZUS5
      Related
      ENSP00000412150.2, OTTHUMP00000200844, ENST00000394775.3, OTTHUMT00000324553
      Conserved Domains (1) summary
      pfam14988
      Location:197402
      DUF4515; Domain of unknown function (DUF4515)
    2. NM_024584.4NP_078860.2  coiled-coil domain-containing protein 121 isoform 3

      See identical proteins and their annotated locations for NP_078860.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream start codon, compared to variant 2. The encoded isoform (3) is shorter than isoform 2.
      Source sequence(s)
      AK125354, BC066936, DB444296
      Consensus CDS
      CCDS1759.1
      UniProtKB/Swiss-Prot
      Q6ZUS5
      Related
      ENSP00000339087.2, OTTHUMP00000158534, ENST00000324364.3, OTTHUMT00000250215
      Conserved Domains (1) summary
      pfam14988
      Location:35240
      DUF4515; Domain of unknown function (DUF4515)

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p7 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p7 Primary Assembly

      Range
      27625638..27629031 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005264560.3XP_005264617.1  coiled-coil domain-containing protein 121 isoform X1

      Conserved Domains (1) summary
      pfam14988
      Location:199404
      DUF4515; Domain of unknown function (DUF4515)

    Alternate CHM1_1.1

    Genomic

    1. NC_018913.2 Alternate CHM1_1.1

      Range
      27779242..27782634 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001142682.1: Suppressed sequence

      Description
      NM_001142682.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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