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    LOC552738 2-hydroxyacyl-CoA lyase 1-like [ Apis mellifera (honey bee) ]

    Gene ID: 552738, updated on 10-May-2024

    Summary

    Gene symbol
    LOC552738
    Gene description
    2-hydroxyacyl-CoA lyase 1-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB17054; GB45184
    Orthologs
    NEW
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    Genomic context

    See LOC552738 in Genome Data Viewer
    Location:
    chromosome: LG11
    Exon count:
    12
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG11 NC_037648.1 (13623664..13628276)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG11 NC_007080.3 (11879985..11884594)

    Linkage Group LG11 - NC_037648.1Genomic Context describing neighboring genes Neighboring gene vesicular glutamate transporter 2.1 Neighboring gene microRNA mir-6040 Neighboring gene uncharacterized LOC107965228 Neighboring gene uncharacterized LOC102656725 Neighboring gene Fas-associated factor 2 Neighboring gene uncharacterized LOC100576532 Neighboring gene serine/threonine-protein kinase RIO3

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables thiamine pyrophosphate binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid alpha-oxidation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    2-hydroxyacyl-CoA lyase 1-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277300.1NP_001264229.1  2-hydroxyacyl-CoA lyase 1-like

      Status: VALIDATED

      Source sequence(s)
      AADG06001790, DB773091
      UniProtKB/TrEMBL
      A0A7M6UX09, A0A8B6WZY3
      Conserved Domains (4) summary
      cd07035
      Location:6160
      TPP_PYR_POX_like; Pyrimidine (PYR) binding domain of POX and related proteins
      PRK09259
      Location:1551
      PRK09259; putative oxalyl-CoA decarboxylase; Validated
      cd02004
      Location:365547
      TPP_BZL_OCoD_HPCL; Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL). Pseudomonas fluorescens biovar I BZL ...
      pfam00205
      Location:191320
      TPP_enzyme_M; Thiamine pyrophosphate enzyme, central domain

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037648.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      13623664..13628276
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)