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    LOC551788 katanin p60 ATPase-containing subunit A-like 2 [ Apis mellifera (honey bee) ]

    Gene ID: 551788, updated on 1-Oct-2024
    Gene symbol
    LOC551788
    Gene description
    katanin p60 ATPase-containing subunit A-like 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB14818; GB46007
    Orthologs
    all
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    See LOC551788 in Genome Data Viewer
    Location:
    chromosome: LG6
    Exon count:
    8
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG6 NC_037643.1 (13360594..13364792, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG6 NC_007075.3 (5953863..5958033)

    Linkage Group LG6 - NC_037643.1Genomic Context describing neighboring genes Neighboring gene Adrenodoxin-like protein 2, mitochondrial Ferredoxin 2 Neighboring gene survival motor neuron Neighboring gene uncharacterized LOC725417 Neighboring gene uncharacterized LOC102656842 Neighboring gene uncharacterized LOC102656672

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    katanin p60 ATPase-containing subunit A-like 2

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037643.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      13360594..13364792 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016912938.2 → XP_016768427.2  katanin p60 ATPase-containing subunit A-like 2

      UniProtKB/TrEMBL
      A0A7M7IIJ7, A0A8B7KK92
      Conserved Domains (2) summary
      smart00667
      Location:52 → 83
      LisH; Lissencephaly type-1-like homology motif
      COG0464
      Location:215 → 473
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials