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    KLF16 KLF transcription factor 16 [ Sus scrofa (pig) ]

    Gene ID: 100302638, updated on 5-Sep-2025
    Official Symbol
    KLF16provided by VGNC
    Official Full Name
    KLF transcription factor 16provided by VGNC
    Primary source
    VGNC:VGNC:89496
    See related
    Ensembl:ENSSSCG00000024672 RGD:13956601
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 22.1), spleen (RPKM 13.7) and 8 other tissues See more
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See KLF16 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (76680219..76690823)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (77457928..77468123, complement)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110259374 Neighboring gene abhydrolase domain containing 17A, depalmitoylase Neighboring gene basic proline-rich protein-like Neighboring gene phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN pseudogene Neighboring gene RNA exonuclease 1 homolog Neighboring gene ATPase phospholipid transporting 8B3

    Go to nucleotide: Graphics FASTA GenBank

    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Related articles in PubMed

    1. Porcine KLF gene family: Structure, mapping, and phylogenetic analysis. Chen Z, et al. Genomics, 2010 Feb. PMID 19941950
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    Krueppel-like factor 16
    Names
    Kruppel like factor 16
    NP_001157481.1

    Length

    • 253

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164009.1 → NP_001157481.1  Krueppel-like factor 16

      See identical proteins and their annotated locations for NP_001157481.1

      Status: PROVISIONAL

      Source sequence(s)
      GQ274322
      UniProtKB/TrEMBL
      A0A8D0WAZ6, A0A8D0ZFA0, C7EMF4
      Related
      ENSSSCP00000021635.2, ENSSSCT00000029522.4
      Conserved Domains (3) summary
      COG5048
      Location:126 → 188
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:133 → 152
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:174 → 199
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      76680219..76690823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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