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    ATMIN ATM interactor [ Pan troglodytes (chimpanzee) ]

    Gene ID: 738730, updated on 6-Jun-2024

    Summary

    Official Symbol
    ATMINprovided by VGNC
    Official Full Name
    ATM interactorprovided by VGNC
    Primary source
    VGNC:VGNC:13665
    Locus tag
    CK820_G0029341
    See related
    Ensembl:ENSPTRG00000008384
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
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    Genomic context

    See ATMIN in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (79197815..79209217)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (79197719..79209121)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101058905 Neighboring gene C-X9-C motif containing 2 Neighboring gene centromere protein N Neighboring gene chromosome 16 C16orf46 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene polycystin-1-like protein 2 Neighboring gene glycine cleavage system protein H

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    ATM interactor
    Names
    ATM/ATR-Substrate Chk2-Interacting Zn2+-finger protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001280340.1NP_001267269.1  ATM interactor

      See identical proteins and their annotated locations for NP_001267269.1

      Status: PROVISIONAL

      Source sequence(s)
      AK305496
      UniProtKB/TrEMBL
      G2HFI2, H2RHY7
      Related
      ENSPTRP00000014315.4, ENSPTRT00000015460.4

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      79197815..79209217
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016928582.3XP_016784071.1  ATM interactor isoform X1

      UniProtKB/TrEMBL
      A0A2J8LEF9, A0A6D2WYT7, H2RHJ0
      Related
      ENSPTRP00000060993.2
      Conserved Domains (1) summary
      sd00017
      Location:132159
      ZF_C2H2; C2H2 Zn finger [structural motif]
    2. XM_063796287.1XP_063652357.1  ATM interactor isoform X2

      UniProtKB/TrEMBL
      A0A2J8LEG5, A0A6D2XH47, H2QBK7, H2RHY7
    3. XM_063796288.1XP_063652358.1  ATM interactor isoform X2

      UniProtKB/TrEMBL
      A0A2J8LEG5, A0A6D2XH47, H2QBK7, H2RHY7