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    myt1la myelin transcription factor 1-like, a [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101166026, updated on 8-Mar-2024
    Gene symbol
    myt1la
    Gene description
    myelin transcription factor 1-like, a
    See related
    EnsemblRapid:ENSORLG00000018130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    zebrafish all
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    See myt1la in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 24 NC_019882.2 (22467398..22524113)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 24 NC_019882.1 (23395448..23447497)

    Chromosome 24 - NC_019882.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene uncharacterized LOC111947069 Neighboring gene ribonuclease H1 Neighboring gene ribosomal protein S7 Neighboring gene E2F transcription factor 6 Neighboring gene HIVEP zinc finger 2a

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    myelin transcription factor 1-like protein

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019882.2 Reference ASM223467v1 Primary Assembly

      Range
      22467398..22524113
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023952977.1 → XP_023808745.1  myelin transcription factor 1-like protein isoform X3

      UniProtKB/TrEMBL
      A0A3B3H485, A0A3P9M9H1
      Related
      ENSORLP00000026032.1, ENSORLT00000034439.2
      Conserved Domains (3) summary
      pfam01530
      Location:954 → 982
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:672 → 922
      MYT1; Myelin transcription factor 1
      pfam15905
      Location:1113 → 1186
      HMMR_N; Hyaluronan mediated motility receptor N-terminal

    2. XM_023952975.1 → XP_023808743.1  myelin transcription factor 1-like protein isoform X1

      UniProtKB/TrEMBL
      A0A3P9M9H1
      Conserved Domains (3) summary
      pfam01530
      Location:963 → 991
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:672 → 931
      MYT1; Myelin transcription factor 1
      pfam15905
      Location:1122 → 1195
      HMMR_N; Hyaluronan mediated motility receptor N-terminal

    3. XM_023952974.1 → XP_023808742.1  myelin transcription factor 1-like protein isoform X1

      UniProtKB/TrEMBL
      A0A3P9M9H1
      Conserved Domains (3) summary
      pfam01530
      Location:963 → 991
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:672 → 931
      MYT1; Myelin transcription factor 1
      pfam15905
      Location:1122 → 1195
      HMMR_N; Hyaluronan mediated motility receptor N-terminal

    4. XM_023952976.1 → XP_023808744.1  myelin transcription factor 1-like protein isoform X2

      UniProtKB/TrEMBL
      A0A3P9M9H1
      Conserved Domains (3) summary
      pfam01530
      Location:962 → 990
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:671 → 930
      MYT1; Myelin transcription factor 1
      pfam15905
      Location:1121 → 1194
      HMMR_N; Hyaluronan mediated motility receptor N-terminal

    5. XM_023952978.1 → XP_023808746.1  myelin transcription factor 1-like protein isoform X4

      UniProtKB/TrEMBL
      A0A3B3HBW0
      Related
      ENSORLP00000039370.2, ENSORLT00000027050.2
      Conserved Domains (3) summary
      pfam01530
      Location:963 → 991
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:672 → 931
      MYT1; Myelin transcription factor 1
      pfam15905
      Location:1122 → 1195
      HMMR_N; Hyaluronan mediated motility receptor N-terminal
    Nucleotide Protein
    Heading Accession and Version

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