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    e2f5 E2F transcription factor 5 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101164754, updated on 10-Feb-2026
    Gene symbol
    e2f5
    Gene description
    E2F transcription factor 5
    See related
    EnsemblRapid:ENSORLG00000017919
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See e2f5 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2026_01 current Olatipes_Hd-rR_3.1 (GCF_053564925.1) 17 NC_136253.1 (35071382..35077485, complement)
    103 previous assembly ASM223467v1 (GCF_002234675.1) 17 NC_019875.2 (30006525..30012628, complement)

    Chromosome 17 - NC_136253.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111949050 Neighboring gene atypical chemokine receptor 4a Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene RNA-binding Raly-like protein

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    transcription factor E2F5

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_053564925.1-RS_2026_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Olatipes_Hd-rR_3.1

    Genomic

    1. NC_136253.1 Reference Olatipes_Hd-rR_3.1

      Range
      35071382..35077485 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023965318.1 → XP_023821086.1  transcription factor E2F5 isoform X3

      UniProtKB/TrEMBL
      A0A3P9LS65, H2MUG2
      Related
      ENSORLP00000059863.1, ENSORLT00000102888.1
      Conserved Domains (2) summary
      cd14660
      Location:92 → 196
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:14 → 79
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain

    2. XM_078934970.1 → XP_078791096.1  transcription factor E2F5 isoform X2

    3. XM_023965317.2 → XP_023821085.1  transcription factor E2F5 isoform X1

      UniProtKB/TrEMBL
      A0A3P9LS65
      Conserved Domains (2) summary
      cd14660
      Location:117 → 221
      E2F_DD; Dimerization domain of E2F transcription factors
      pfam02319
      Location:14 → 104
      E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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