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    elk1 ETS transcription factor ELK1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101165887, updated on 10-Feb-2026
    Gene symbol
    elk1
    Gene description
    ETS transcription factor ELK1
    See related
    EnsemblRapid:ENSORLG00000016950
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See elk1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2026_01 current Olatipes_Hd-rR_3.1 (GCF_053564925.1) 7 NC_136243.1 (1526254..1561697)
    103 previous assembly ASM223467v1 (GCF_002234675.1) 7 NC_019865.2 (33720158..33757722, complement)

    Chromosome 7 - NC_136243.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC144993961 Neighboring gene cyclin dependent kinase 20 Neighboring gene ubiquitously-expressed, prefoldin-like chaperone Neighboring gene leucine-rich repeat neuronal protein 1 Neighboring gene serine/threonine kinase 38a

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    ETS domain-containing protein Elk-1

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_053564925.1-RS_2026_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Olatipes_Hd-rR_3.1

    Genomic

    1. NC_136243.1 Reference Olatipes_Hd-rR_3.1

      Range
      1526254..1561697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004071081.4 → XP_004071129.2  ETS domain-containing protein Elk-1 isoform X3

      UniProtKB/TrEMBL
      A0A3P9LIQ5, H2MR29
      Related
      ENSORLP00000079158.1
      Conserved Domains (2) summary
      smart00413
      Location:20 → 105
      ETS; erythroblast transformation specific domain
      pfam07160
      Location:381 → 485
      DUF1395; Protein of unknown function (DUF1395)

    2. XM_078950011.1 → XP_078806137.1  ETS domain-containing protein Elk-1 isoform X1

    3. XM_078950012.1 → XP_078806138.1  ETS domain-containing protein Elk-1 isoform X2

    RNA

    1. XR_002290590.2 RNA Sequence

    2. XR_013657278.1 RNA Sequence

    3. XR_002290591.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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