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    atf5a activating transcription factor 5a [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101175499, updated on 10-Feb-2026
    Gene symbol
    atf5a
    Gene description
    activating transcription factor 5a
    See related
    EnsemblRapid:ENSORLG00000007564
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See atf5a in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2026_01 current Olatipes_Hd-rR_3.1 (GCF_053564925.1) 14 NC_136250.1 (16383915..16388663)
    103 previous assembly ASM223467v1 (GCF_002234675.1) 14 NC_019872.2 (15279222..15282493)

    Chromosome 14 - NC_136250.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology-like domain, family B, member 1a Neighboring gene H2A.X variant histone Neighboring gene serine/threonine kinase 36 (fused homolog, Drosophila) Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 15a Neighboring gene uncharacterized LOC144983615

    Go to nucleotide: Graphics FASTA GenBank

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    uncharacterized protein atf5a

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_053564925.1-RS_2026_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Olatipes_Hd-rR_3.1

    Genomic

    1. NC_136250.1 Reference Olatipes_Hd-rR_3.1

      Range
      16383915..16388663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011483557.4 → XP_011481859.2  uncharacterized protein atf5a isoform X1

      UniProtKB/TrEMBL
      A0A3P9HLC8, H2LTQ9
      Related
      ENSORLP00000009479.2
      Conserved Domains (1) summary
      cd14692
      Location:427 → 489
      bZIP_ATF4; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-4 (ATF-4) and similar proteins: a DNA-binding and dimerization domain

    2. XM_023962602.2 → XP_023818370.1  uncharacterized protein atf5a isoform X2

      UniProtKB/TrEMBL
      A0A3B3IHB0
      Conserved Domains (1) summary
      cd14692
      Location:373 → 435
      bZIP_ATF4; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-4 (ATF-4) and similar proteins: a DNA-binding and dimerization domain
    Nucleotide Protein Strain
    Heading Accession and Version

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