U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC101170365 max-interacting protein 1 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101170365, updated on 9-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC101170365
    Gene description
    max-interacting protein 1
    See related
    EnsemblRapid:ENSORLG00000005955
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC101170365 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current ASM223467v1 (GCF_002234675.1) 15 NC_019873.2 (19592290..19597306, complement)
    102 previous assembly ASM31367v1 (GCF_000313675.1) 15 NC_019873.1 (18861257..18866271, complement)

    Chromosome 15 - NC_019873.2Genomic Context describing neighboring genes Neighboring gene alpha-2A adrenergic receptor-like Neighboring gene survival motor neuron domain containing 1 Neighboring gene adducin 3 (gamma) b Neighboring gene VPS10 domain-containing receptor SorCS1 Neighboring gene uncharacterized LOC111948743

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    max-interacting protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM223467v1 Primary Assembly

    Genomic

    1. NC_019873.2 Reference ASM223467v1 Primary Assembly

      Range
      19592290..19597306 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020709505.2 → XP_020565164.1  max-interacting protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A3P9HYK0
      Conserved Domains (1) summary
      cd00083
      Location:109 → 163
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

    2. XM_011484395.3 → XP_011482697.1  max-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A3P9HYD0, H2LN68
      Related
      ENSORLP00000007493.2, ENSORLT00000007494.3
      Conserved Domains (1) summary
      smart00353
      Location:156 → 197
      HLH; helix loop helix domain

    3. XM_004077087.4 → XP_004077135.1  max-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A3P9HYK0
      Related
      ENSORLP00000081911.1, ENSORLT00000047687.1
      Conserved Domains (1) summary
      cd00083
      Location:109 → 163
      HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

    RNA

    1. XR_002291847.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials