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    znf652 zinc finger protein 652 [ Oryzias latipes (Japanese medaka) ]

    Gene ID: 101167712, updated on 12-Feb-2026
    Gene symbol
    znf652
    Gene description
    zinc finger protein 652
    See related
    EnsemblRapid:ENSORLG00000003126
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias latipes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See znf652 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2026_01 current Olatipes_Hd-rR_3.1 (GCF_053564925.1) 8 NC_136244.1 (22653104..22668578)
    103 previous assembly ASM223467v1 (GCF_002234675.1) 8 NC_019866.2 (5497569..5512893, complement)

    Chromosome 8 - NC_136244.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:busm1-163l24.3 Neighboring gene prohibitin 1 Neighboring gene phosphoethanolamine/phosphocholine phosphatase 1 Neighboring gene elongation factor Tu GTP binding domain containing 2 Neighboring gene gap junction protein gamma 1

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    zinc finger protein 652

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_053564925.1-RS_2026_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Olatipes_Hd-rR_3.1

    Genomic

    1. NC_136244.1 Reference Olatipes_Hd-rR_3.1

      Range
      22653104..22668578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_078951804.1 → XP_078807930.1  zinc finger protein 652

    2. XM_004071557.5 → XP_004071605.1  zinc finger protein 652

      See identical proteins and their annotated locations for XP_004071605.1

      UniProtKB/TrEMBL
      A0A3P9KK38, H2LD94
      Conserved Domains (4) summary
      COG5048
      Location:476 → 525
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:418 → 501
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:424 → 444
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl27293
      Location:277 → 341
      UFD1; Ubiquitin fusion degradation protein UFD1

    3. XM_011477918.4 → XP_011476220.1  zinc finger protein 652

      See identical proteins and their annotated locations for XP_011476220.1

      UniProtKB/TrEMBL
      A0A3P9KK38, H2LD94
      Conserved Domains (4) summary
      COG5048
      Location:476 → 525
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:418 → 501
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:424 → 444
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl27293
      Location:277 → 341
      UFD1; Ubiquitin fusion degradation protein UFD1
    Nucleotide Protein Strain
    Heading Accession and Version

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