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    LOC100707699 nuclear receptor subfamily 1 group D member 1 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100707699, updated on 19-Jun-2025
    Gene symbol
    LOC100707699
    Gene description
    nuclear receptor subfamily 1 group D member 1
    See related
    Ensembl:ENSONIG00000019164
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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    See LOC100707699 in Genome Data Viewer
    Location:
    chromosome: LG5
    Exon count:
    8
    Annotation release Status Assembly LG Location
    RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG5 NC_031970.2 (24174918..24186085, complement)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG5 NC_031970.1 (18145754..18156937, complement)

    Linkage Group LG5 - NC_031970.2Genomic Context describing neighboring genes Neighboring gene RNA-binding motif, single-stranded-interacting protein 2 Neighboring gene Fas apoptotic inhibitory molecule 2b Neighboring gene retinoic acid receptor gamma-A Neighboring gene calcium-binding and coiled-coil domain-containing protein 1

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    nuclear receptor subfamily 1 group D member 1

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    RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031970.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      24174918..24186085 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005469464.4 → XP_005469521.1  nuclear receptor subfamily 1 group D member 1

      UniProtKB/TrEMBL
      A0A669F9Y6, I3KSM8
      Related
      ENSONIP00000024124.2, ENSONIT00000024145.2
      Conserved Domains (2) summary
      cd07166
      Location:114 → 202
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
      cl11397
      Location:384 → 572
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
    Nucleotide Protein
    Heading Accession and Version

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