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    LOC100695208 transcription factor 12 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100695208, updated on 19-Jun-2025
    Gene symbol
    LOC100695208
    Gene description
    transcription factor 12
    See related
    Ensembl:ENSONIG00000008337
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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    Try the new Transcripts and proteins table
    See LOC100695208 in Genome Data Viewer
    Location:
    chromosome: LG7
    Exon count:
    13
    Annotation release Status Assembly LG Location
    RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (50085580..50098152, complement)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (48519934..48532513)

    Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene aquaporin-9 Neighboring gene cingulin-like protein 1 Neighboring gene uncharacterized LOC112847522 Neighboring gene regulatory factor X7b Neighboring gene protogenin B

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    transcription factor 12

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    RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      50085580..50098152 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005450854.4 → XP_005450911.1  transcription factor 12

      UniProtKB/TrEMBL
      I3JNN9
      Related
      ENSONIP00000010483.2, ENSONIT00000010492.2
      Conserved Domains (1) summary
      cd18945
      Location:388 → 472
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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