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    LOC100702555 T-box transcription factor TBX3 [ Oreochromis niloticus (Nile tilapia) ]

    Gene ID: 100702555, updated on 19-Jun-2025
    Gene symbol
    LOC100702555
    Gene description
    T-box transcription factor TBX3
    See related
    Ensembl:ENSONIG00000001919
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oreochromis niloticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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    See LOC100702555 in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    7
    Annotation release Status Assembly LG Location
    RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG10 NC_031975.2 (7856573..7861442, complement)
    103 previous assembly ASM185804v2 (GCF_001858045.1) LG10 NC_031975.1 (26437008..26441877)

    Linkage Group LG10 - NC_031975.2Genomic Context describing neighboring genes Neighboring gene LIM/homeobox protein Lhx1 Neighboring gene acetyl-CoA carboxylase alpha Neighboring gene uncharacterized LOC112847983 Neighboring gene protein phosphatase 1D

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    T-box transcription factor TBX3

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    RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference O_niloticus_UMD_NMBU Primary Assembly

    Genomic

    1. NC_031975.2 Reference O_niloticus_UMD_NMBU Primary Assembly

      Range
      7856573..7861442 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005471922.3 → XP_005471979.1  T-box transcription factor TBX3

      UniProtKB/TrEMBL
      I3J0L4
      Related
      ENSONIP00000002404.2, ENSONIT00000002405.2
      Conserved Domains (1) summary
      cd00182
      Location:81 → 266
      TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases