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    ZFP30 ZFP30 zinc finger protein [ Microcebus murinus (gray mouse lemur) ]

    Gene ID: 105876855, updated on 13-Mar-2024

    Summary

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    Gene symbol
    ZFP30
    Gene description
    ZFP30 zinc finger protein
    See related
    Ensembl:ENSMICG00000009515
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Microcebus murinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
    Orthologs
    human all
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    Genomic context

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    See ZFP30 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    101 current Mmur_3.0 (GCF_000165445.2) 22 NC_033681.1 (24482168..24537607)
    100 previous assembly Mmur_2.0 (GCF_000165445.1) Unplaced Scaffold NW_012196797.1 (2060854..2072577)

    Chromosome 22 - NC_033681.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 345-like Neighboring gene zinc finger protein 573 Neighboring gene zinc finger protein 607 Neighboring gene zinc finger protein 790 Neighboring gene uncharacterized LOC105877019 Neighboring gene zinc finger protein 420 Neighboring gene transcription initiation factor TFIID subunit 13 pseudogene Neighboring gene zinc finger protein 585A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 30 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Microcebus murinus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmur_3.0 Primary Assembly

    Genomic

    1. NC_033681.1 Reference Mmur_3.0 Primary Assembly

      Range
      24482168..24537607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012774831.2 → XP_012630285.2  zinc finger protein 30 homolog isoform X3

      UniProtKB/TrEMBL
      A0A8B7H4B7
      Conserved Domains (5) summary
      smart00349
      Location:6 → 66
      KRAB; krueppel associated box
      COG5048
      Location:337 → 724
      COG5048; FOG: Zn-finger [General function prediction only]
      COG5189
      Location:755 → 838
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:621 → 641
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:186 → 210
      zf-H2C2_2; Zinc-finger double domain

    2. XM_012774827.1 → XP_012630281.1  zinc finger protein 30 homolog isoform X1

      See identical proteins and their annotated locations for XP_012630281.1

      UniProtKB/TrEMBL
      A0A8B7H270
      Conserved Domains (5) summary
      smart00349
      Location:6 → 67
      KRAB; krueppel associated box
      COG5048
      Location:163 → 523
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:454 → 474
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:6 → 45
      KRAB; KRAB box
      pfam13465
      Location:242 → 265
      zf-H2C2_2; Zinc-finger double domain

    3. XM_012774828.1 → XP_012630282.1  zinc finger protein 30 homolog isoform X1

      See identical proteins and their annotated locations for XP_012630282.1

      UniProtKB/TrEMBL
      A0A8B7H270
      Conserved Domains (5) summary
      smart00349
      Location:6 → 67
      KRAB; krueppel associated box
      COG5048
      Location:163 → 523
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:454 → 474
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:6 → 45
      KRAB; KRAB box
      pfam13465
      Location:242 → 265
      zf-H2C2_2; Zinc-finger double domain

    4. XM_012774829.2 → XP_012630283.1  zinc finger protein 30 homolog isoform X1

      See identical proteins and their annotated locations for XP_012630283.1

      UniProtKB/TrEMBL
      A0A8B7H270
      Related
      ENSMICP00000006821.3, ENSMICT00000007495.3
      Conserved Domains (5) summary
      smart00349
      Location:6 → 67
      KRAB; krueppel associated box
      COG5048
      Location:163 → 523
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:454 → 474
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:6 → 45
      KRAB; KRAB box
      pfam13465
      Location:242 → 265
      zf-H2C2_2; Zinc-finger double domain

    5. XM_012774834.2 → XP_012630288.1  zinc finger protein 30 homolog isoform X2

      See identical proteins and their annotated locations for XP_012630288.1

      UniProtKB/TrEMBL
      A0A8B7H271
      Conserved Domains (3) summary
      COG5048
      Location:58 → 417
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:232 → 252
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:104 → 127
      zf-H2C2_2; Zinc-finger double domain

    6. XM_012774832.2 → XP_012630286.1  zinc finger protein 30 homolog isoform X2

      See identical proteins and their annotated locations for XP_012630286.1

      UniProtKB/TrEMBL
      A0A8B7H271
      Conserved Domains (3) summary
      COG5048
      Location:58 → 417
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:232 → 252
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:104 → 127
      zf-H2C2_2; Zinc-finger double domain

    7. XM_012774833.2 → XP_012630287.1  zinc finger protein 30 homolog isoform X2

      See identical proteins and their annotated locations for XP_012630287.1

      UniProtKB/TrEMBL
      A0A8B7H271
      Conserved Domains (3) summary
      COG5048
      Location:58 → 417
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:232 → 252
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:104 → 127
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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