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    RFX2 regulatory factor X2 [ Loxodonta africana (African savanna elephant) ]

    Gene ID: 100662060, updated on 11-Apr-2024
    Gene symbol
    RFX2
    Gene description
    regulatory factor X2
    See related
    EnsemblRapid:ENSLAFG00000013350
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Loxodonta africana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See RFX2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 3 NC_087344.1 (8618402..8728945, complement)
    102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573539.1 (1207396..1320674)

    Chromosome 3 - NC_087344.1Genomic Context describing neighboring genes Neighboring gene RAN binding protein 3 Neighboring gene calcyphosine Neighboring gene small ribosomal subunit protein eS24-like Neighboring gene CD70 molecule

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    DNA-binding protein RFX2

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mLoxAfr1.hap2

    Genomic

    1. NC_087344.1 Reference mLoxAfr1.hap2

      Range
      8618402..8728945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064280377.1 → XP_064136447.1  DNA-binding protein RFX2 isoform X2

    2. XM_064280383.1 → XP_064136453.1  DNA-binding protein RFX2 isoform X8

      Related
      ENSLAFP00000033770.1, ENSLAFT00000051458.1

    3. XM_064280380.1 → XP_064136450.1  DNA-binding protein RFX2 isoform X5

      Related
      ENSLAFP00000037159.1, ENSLAFT00000064248.1

    4. XM_064280376.1 → XP_064136446.1  DNA-binding protein RFX2 isoform X1

    5. XM_064280382.1 → XP_064136452.1  DNA-binding protein RFX2 isoform X7

    6. XM_064280378.1 → XP_064136448.1  DNA-binding protein RFX2 isoform X3

      Related
      ENSLAFP00000034233.1, ENSLAFT00000040417.1

    7. XM_064280384.1 → XP_064136454.1  DNA-binding protein RFX2 isoform X9

      Related
      ENSLAFP00000011176.4, ENSLAFT00000013356.4

    8. XM_064280381.1 → XP_064136451.1  DNA-binding protein RFX2 isoform X6

    9. XM_064280379.1 → XP_064136449.1  DNA-binding protein RFX2 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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