U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC102367663 achaete-scute homolog 1b-like [ Latimeria chalumnae (coelacanth) ]

    Gene ID: 102367663, updated on 2-May-2024
    Gene symbol
    LOC102367663
    Gene description
    achaete-scute homolog 1b-like
    See related
    Ensembl:ENSLACG00000001911
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Latimeria chalumnae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria
    Try the new Gene page
    Try the new Transcripts and proteins table
    See LOC102367663 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_04 current fLatCha1.pri (GCF_037176945.1) 17 NC_088155.1 (38130016..38130591)
    101 previous assembly LatCha1 (GCF_000225785.1) Unplaced Scaffold NW_005823062.1 (33368..34784, complement)

    Chromosome 17 - NC_088155.1Genomic Context describing neighboring genes Neighboring gene tetraspanin-32 Neighboring gene uncharacterized LOC135360359 Neighboring gene uncharacterized LOC106702145 Neighboring gene uncharacterized LOC102347858 Neighboring gene transmembrane protein 216

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in developmental process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    achaete-scute homolog 1b-like

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_037176945.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fLatCha1.pri

    Genomic

    1. NC_088155.1 Reference fLatCha1.pri

      Range
      38130016..38130591
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006013319.2 → XP_006013381.1  achaete-scute homolog 1b-like

      UniProtKB/TrEMBL
      H2ZXL6
      Related
      ENSLACP00000002137.1
      Conserved Domains (1) summary
      smart00353
      Location:85 → 127
      HLH; helix loop helix domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases