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    sfmbt1 Scm like with four mbt domains 1 [ Gadus morhua (Atlantic cod) ]

    Gene ID: 115556860, updated on 17-Mar-2024

    Summary

    Gene symbol
    sfmbt1
    Gene description
    Scm like with four mbt domains 1
    See related
    Ensembl:ENSGMOG00000019301
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gadus morhua
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
    Orthologs
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    Genomic context

    See sfmbt1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current gadMor3.0 (GCF_902167405.1) 13 NC_044060.1 (18604138..18623429)

    Chromosome 13 - NC_044060.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain containing 5a Neighboring gene protein kinase C delta type-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene store-operated calcium entry regulator STIMATE-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_044060.1 Chromosome 13 Reference gadMor3.0 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    scm-like with four MBT domains protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference gadMor3.0 Primary Assembly

    Genomic

    1. NC_044060.1 Reference gadMor3.0 Primary Assembly

      Range
      18604138..18623429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030374254.1XP_030230114.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C4ZU54
      Conserved Domains (4) summary
      cd09581
      Location:796879
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:366465
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:168233
      MBT; mbt repeat
      pfam12140
      Location:523638
      SLED; SLED domain
    2. XM_030374257.1XP_030230117.1  scm-like with four MBT domains protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C4ZU54
      Related
      ENSGMOP00000020754.2, ENSGMOT00000021261.2
      Conserved Domains (4) summary
      cd09581
      Location:795878
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:366465
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:168233
      MBT; mbt repeat
      pfam12140
      Location:522637
      SLED; SLED domain
    3. XM_030374255.1XP_030230115.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C4ZU54
      Conserved Domains (4) summary
      cd09581
      Location:796879
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:366465
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:168233
      MBT; mbt repeat
      pfam12140
      Location:523638
      SLED; SLED domain
    4. XM_030374256.1XP_030230116.1  scm-like with four MBT domains protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C4ZU54
      Conserved Domains (4) summary
      cd09581
      Location:796879
      SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
      smart00561
      Location:366465
      MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
      pfam02820
      Location:168233
      MBT; mbt repeat
      pfam12140
      Location:523638
      SLED; SLED domain