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    rorca RAR-related orphan receptor C a [ Gasterosteus aculeatus (three-spined stickleback) ]

    Gene ID: 120824242, updated on 10-Feb-2026
    Gene symbol
    rorca
    Gene description
    RAR-related orphan receptor C a
    See related
    Ensembl:ENSGACG00000012280
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gasterosteus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See rorca in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2025_12 current fGasAcu3.hap1.1 (GCF_964276395.1) 8 NC_135695.1 (18598667..18609332, complement)
    100 previous assembly GAculeatus_UGA_version5 (GCF_016920845.1) 8 NC_053219.1 (16674202..16681182, complement)

    Chromosome 8 - NC_135695.1Genomic Context describing neighboring genes Neighboring gene SH3-domain GRB2-like 1b Neighboring gene MPN domain containing Neighboring gene sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb Neighboring gene AN1-type zinc finger protein 5 Neighboring gene perilipin 3

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    RAR-related orphan receptor C a

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_964276395.1-RS_2025_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fGasAcu3.hap1.1

    Genomic

    1. NC_135695.1 Reference fGasAcu3.hap1.1

      Range
      18598667..18609332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_078108548.1 → XP_077964674.1  RAR-related orphan receptor C a isoform X2

      UniProtKB/TrEMBL
      A0AAQ4PCN9

    2. XM_040184919.2 → XP_040040853.2  RAR-related orphan receptor C a isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NU27
    Nucleotide Protein
    Heading Accession and Version

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