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    nr1h5 nuclear receptor subfamily 1, group H, member 5 [ Gasterosteus aculeatus (three-spined stickleback) ]

    Gene ID: 120829496, updated on 10-Feb-2026
    Gene symbol
    nr1h5
    Gene description
    nuclear receptor subfamily 1, group H, member 5
    See related
    Ensembl:ENSGACG00000004938
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gasterosteus aculeatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Gasterosteales; Gasterosteidae; Gasterosteus
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See nr1h5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2025_12 current fGasAcu3.hap1.1 (GCF_964276395.1) 2 NC_135689.1 (16556997..16566393)
    100 previous assembly GAculeatus_UGA_version5 (GCF_016920845.1) 12 NC_053223.1 (15412098..15421993)

    Chromosome 2 - NC_135689.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 33 Neighboring gene solute carrier family 66 member 1 Neighboring gene bromodomain and PHD finger containing, 3b Neighboring gene mitogen-activated protein kinase 13

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in bile acid signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of inflammatory response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    nuclear receptor subfamily 1, group H, member 5

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_964276395.1-RS_2025_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fGasAcu3.hap1.1

    Genomic

    1. NC_135689.1 Reference fGasAcu3.hap1.1

      Range
      16556997..16566393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040193629.2 → XP_040049563.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0
      Conserved Domains (2) summary
      cl02596
      Location:142 → 225
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:264 → 484
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    2. XM_040193635.2 → XP_040049569.1  nuclear receptor subfamily 1, group H, member 5 isoform X2

      UniProtKB/TrEMBL
      G3NMG0
      Conserved Domains (2) summary
      cl02596
      Location:142 → 225
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:264 → 431
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    3. XM_078085302.1 → XP_077941428.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0

    4. XM_078085308.1 → XP_077941434.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0

    5. XM_040193634.2 → XP_040049568.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0
      Conserved Domains (2) summary
      cl02596
      Location:142 → 225
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:264 → 484
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    6. XM_040193630.2 → XP_040049564.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0
      Conserved Domains (2) summary
      cl02596
      Location:142 → 225
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:264 → 484
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    7. XM_040193631.2 → XP_040049565.1  nuclear receptor subfamily 1, group H, member 5 isoform X1

      UniProtKB/TrEMBL
      A0AAQ4NMX8, G3NMG0
      Conserved Domains (2) summary
      cl02596
      Location:142 → 225
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
      cl11397
      Location:264 → 484
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
    Nucleotide Protein
    Heading Accession and Version

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