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    Tfam transcription factor A, mitochondrial [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105986273, updated on 13-Mar-2024
    Gene symbol
    Tfam
    Gene description
    transcription factor A, mitochondrial
    See related
    Ensembl:ENSDORG00000014013
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    all
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    Try the new Transcripts and proteins table
    See Tfam in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267250.1 (7227014..7238016)

    NW_012267250.1Genomic Context describing neighboring genes Neighboring gene CDGSH iron sulfur domain 1 Neighboring gene ubiquitin conjugating enzyme E2 D1 Neighboring gene BicC family RNA binding protein 1 Neighboring gene 40S ribosomal protein S23 pseudogene

    Genomic Sequence:
    NW_012267250.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    transcription factor A, mitochondrial

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267250.1 Reference Dord_2.0

      Range
      7227014..7238016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013017092.1 → XP_012872546.1  transcription factor A, mitochondrial

      UniProtKB/TrEMBL
      A0A1S3F7L8
      Related
      ENSDORP00000013173.2, ENSDORT00000014013.2
      Conserved Domains (2) summary
      cd01390
      Location:155 → 216
      HMGB-UBF_HMG-box; HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone ...
      pfam00505
      Location:50 → 114
      HMG_box; HMG (high mobility group) box
    Nucleotide Protein
    Heading Accession and Version

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