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    c/ebpbeta/delta/epsilon CCAAT enhancer binding protein beta/delta/epsilon homolog [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 778557, updated on 10-Feb-2026
    Gene symbol
    c/ebpbeta/delta/epsilon
    Gene description
    CCAAT enhancer binding protein beta/delta/epsilon homolog
    See related
    Ensembl:ENSCING00000012799
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia; Cionidae; Ciona
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    See c/ebpbeta/delta/epsilon in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2026_01 current ASM1832782v2 (GCF_018327825.1) 3 NC_136095.1 (5640661..5641701, complement)
    104 previous assembly KH (GCF_000224145.3) 3 NC_020168.2 (1939234..1940300, complement)

    Chromosome 3 - NC_136095.1Genomic Context describing neighboring genes Neighboring gene RNA cytosine C(5)-methyltransferase NSUN2 Neighboring gene uncharacterized LOC144743258 Neighboring gene di-N-acetylchitobiase-like Neighboring gene CCAAT enhancer binding protein alpha/gamma homolog Neighboring gene uncharacterized LOC100177741

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Gene expression profiles of transcription factors and signaling molecules in the ascidian embryo: towards a comprehensive understanding of gene networks. Imai KS, et al. Development, 2004 Aug. PMID 15269171
    2. Genomewide surveys of developmentally relevant genes in Ciona intestinalis. Satou Y, et al. Dev Genes Evol, 2003 Jun. PMID 12736827
    3. An integrated database of the ascidian, Ciona intestinalis: towards functional genomics. Satou Y, et al. Zoolog Sci, 2005 Aug. PMID 16141696
    4. A cDNA resource from the basal chordate Ciona intestinalis. Satou Y, et al. Genesis, 2002 Aug. PMID 12203911
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    CCAAT enhancer binding protein beta/delta/epsilon homolog

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078197.1 → NP_001071665.1  CCAAT enhancer binding protein beta/delta/epsilon homolog

      See identical proteins and their annotated locations for NP_001071665.1

      Status: PROVISIONAL

      Source sequence(s)
      AB210333
      UniProtKB/TrEMBL
      A0A1W2VNR9, F6WQK5, Q4H3T9
      Related
      ENSCINP00000023749, ENSCINT00000023995
      Conserved Domains (1) summary
      cd14713
      Location:68 → 128
      bZIP_CEBPG; Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein gamma (CEBPG): a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: GCF_018327825.1-RS_2026_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1832782v2 Primary Assembly

    Genomic

    1. NC_136095.1 Reference ASM1832782v2 Primary Assembly

      Range
      5640661..5641701 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_078626473.1 → XP_078482599.1  CCAAT enhancer binding protein beta/delta/epsilon homolog

      UniProtKB/TrEMBL
      F6WQK5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials