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    CBFA2T2 CBFA2/RUNX1 partner transcriptional co-repressor 2 [ Bos taurus (cattle) ]

    Gene ID: 527740, updated on 6-Jun-2024

    Summary

    Gene symbol
    CBFA2T2
    Gene description
    CBFA2/RUNX1 partner transcriptional co-repressor 2
    See related
    BGD:BT19075; Ensembl:ENSBTAG00000010131
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See CBFA2T2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (62957688..63101726)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene CDK5 regulatory subunit associated protein 1 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC100848568 Neighboring gene syntrophin alpha 1 Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene large ribosomal subunit protein uL22-like Neighboring gene chromosome 13 C20orf144 homolog Neighboring gene N-terminal EF-hand calcium binding protein 3 Neighboring gene actin like 10

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    protein CBFA2T2
    Names
    CBFA2/RUNX1 translocation partner 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      62957688..63101726
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002692301.7XP_002692347.3  protein CBFA2T2 isoform X1

      See identical proteins and their annotated locations for XP_002692347.3

      UniProtKB/TrEMBL
      F1MJ18
      Related
      ENSBTAP00000013366.5, ENSBTAT00000013366.6
      Conserved Domains (4) summary
      PRK00409
      Location:429497
      PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed
      pfam08788
      Location:322388
      NHR2; NHR2 domain like
      pfam01753
      Location:498534
      zf-MYND; MYND finger
      pfam07531
      Location:106194
      TAFH; NHR1 homology to TAF
    2. XM_010811664.4XP_010809966.2  protein CBFA2T2 isoform X2

      Conserved Domains (4) summary
      PRK00409
      Location:433496
      PRK00409; recombination and DNA strand exchange inhibitor protein; Reviewed
      pfam08788
      Location:322388
      NHR2; NHR2 domain like
      pfam01753
      Location:497533
      zf-MYND; MYND finger
      pfam07531
      Location:106194
      TAFH; NHR1 homology to TAF
    3. XM_015474273.3XP_015329759.1  protein CBFA2T2 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LNW6
      Related
      ENSBTAP00000058542.2, ENSBTAT00000084073.2
      Conserved Domains (4) summary
      pfam01753
      Location:475511
      zf-MYND; MYND finger
      pfam07531
      Location:106192
      TAFH; NHR1 homology to TAF
      pfam08788
      Location:322388
      NHR2; NHR2 domain like
      cl27055
      Location:363474
      MutS_III; MutS domain III

    RNA

    1. XR_003037873.2 RNA Sequence