U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GPATCH8 G-patch domain containing 8 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100484435, updated on 8-Mar-2024

    Summary

    Gene symbol
    GPATCH8
    Gene description
    G-patch domain containing 8
    Locus tag
    PANDA_008456
    See related
    Ensembl:ENSAMEG00000018376
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See GPATCH8 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current ASM200744v2 (GCF_002007445.1) 13 NC_048230.1 (27504929..27612242, complement)
    102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217649.1 (741010..847329, complement)

    Chromosome 13 - NC_048230.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 171 member A2 Neighboring gene integrin subunit alpha 2b Neighboring gene uncharacterized LOC117795666 Neighboring gene frizzled class receptor 2

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    G patch domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM200744v2 Primary Assembly

    Genomic

    1. NC_048230.1 Reference ASM200744v2 Primary Assembly

      Range
      27504929..27612242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002919743.4XP_002919789.1  G patch domain-containing protein 8 isoform X1

      UniProtKB/TrEMBL
      D2HCV7, G1MJ80
      Related
      ENSAMEP00000019415.2, ENSAMET00000020184.2
      Conserved Domains (3) summary
      pfam01585
      Location:4082
      G-patch; G-patch domain
      pfam12171
      Location:136163
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
      cl02488
      Location:94206
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    2. XM_011225655.3XP_011223957.1  G patch domain-containing protein 8 isoform X2

      See identical proteins and their annotated locations for XP_011223957.1

      UniProtKB/TrEMBL
      D2HCV7
      Conserved Domains (2) summary
      pfam12171
      Location:5885
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
      cl02488
      Location:16128
      SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    3. XM_019800217.2XP_019655776.1  G patch domain-containing protein 8 isoform X2

      UniProtKB/TrEMBL
      D2HCV7
    4. XM_034641517.1XP_034497408.1  G patch domain-containing protein 8 isoform X2

      UniProtKB/TrEMBL
      D2HCV7
    5. XM_034641518.1XP_034497409.1  G patch domain-containing protein 8 isoform X2

      UniProtKB/TrEMBL
      D2HCV7