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    CDKN2AIPNL CDKN2A interacting protein N-terminal like [ Homo sapiens (human) ]

    Gene ID: 91368, updated on 17-Jun-2019

    Summary

    Official Symbol
    CDKN2AIPNLprovided by HGNC
    Official Full Name
    CDKN2A interacting protein N-terminal likeprovided by HGNC
    Primary source
    HGNC:HGNC:30545
    See related
    Ensembl:ENSG00000237190
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C2AIL
    Expression
    Ubiquitous expression in thyroid (RPKM 3.8), testis (RPKM 3.7) and 25 other tissues See more
    Orthologs

    Genomic context

    See CDKN2AIPNL in Genome Data Viewer
    Location:
    5q31.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (134402065..134414625, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (133737756..133747598, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene cyclin dependent kinase like 3 Neighboring gene ribosomal protein S13 pseudogene 6 Neighboring gene ubiquitin conjugating enzyme E2 B Neighboring gene uncharacterized LOC102546229 Neighboring gene ribosomal protein S10 pseudogene 11

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC13017

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    CDKN2AIP N-terminal-like protein
    Names
    CDKN2A-interacting protein N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080656.3NP_542387.1  CDKN2AIP N-terminal-like protein

      See identical proteins and their annotated locations for NP_542387.1

      Status: VALIDATED

      Source sequence(s)
      BC008293, BM997508
      Consensus CDS
      CCDS4175.1
      UniProtKB/Swiss-Prot
      Q96HQ2
      Related
      ENSP00000394183.2, ENST00000458198.3
      Conserved Domains (1) summary
      pfam11952
      Location:25113
      XTBD; XRN-Two Binding Domain, XTBD

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

      Range
      134402065..134414625 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011543709.2XP_011542011.1  CDKN2AIP N-terminal-like protein isoform X1

      Conserved Domains (1) summary
      pfam11952
      Location:47102
      XTBD; XRN-Two Binding Domain, XTBD
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