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    TP53I13 tumor protein p53 inducible protein 13 [ Homo sapiens (human) ]

    Gene ID: 90313, updated on 17-Jun-2019

    Summary

    Official Symbol
    TP53I13provided by HGNC
    Official Full Name
    tumor protein p53 inducible protein 13provided by HGNC
    Primary source
    HGNC:HGNC:25102
    See related
    Ensembl:ENSG00000167543
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DSCP1
    Expression
    Ubiquitous expression in fat (RPKM 17.1), spleen (RPKM 12.9) and 25 other tissues See more
    Orthologs

    Genomic context

    See TP53I13 in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (29567180..29573157)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (27894198..27900175)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene TAO kinase 1 Neighboring gene RNA, U6 small nuclear 1034, pseudogene Neighboring gene abhydrolase domain containing 15 Neighboring gene GIT ArfGAP 1 Neighboring gene ankyrin repeat domain 13B Neighboring gene coronin 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    negative regulation of cell cycle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to UV IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to drug IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    response to organic cyclic compound IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    tumor protein p53-inducible protein 13
    Names
    damage-stimulated cytoplasmic protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001346077.1NP_001333006.1  tumor protein p53-inducible protein 13 isoform b

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode isoform b.
      Source sequence(s)
      AC104564
      UniProtKB/TrEMBL
      A0A024QZ67
    2. NM_001346078.1NP_001333007.1  tumor protein p53-inducible protein 13 isoform b

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode isoform b.
      Source sequence(s)
      AC104564
      UniProtKB/TrEMBL
      A0A024QZ67
    3. NM_001346079.2NP_001333008.1  tumor protein p53-inducible protein 13 isoform c precursor

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
      Source sequence(s)
      AC104564
    4. NM_001346081.2NP_001333010.1  tumor protein p53-inducible protein 13 isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) lacks an alternate exon and uses an alternate splice junction compared to variant 1. The resulting isoform (d) is shorter at the N-terminus compared to isoform a. Variants 5 and 6 both encode the same isoform (d).
      Source sequence(s)
      AC104564
    5. NM_001346082.1NP_001333011.1  tumor protein p53-inducible protein 13 isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) has an alternate 5' end, lacks an alternate exon, and uses an alternate splice junction compared to variant 1. The resulting isoform (d) is shorter at the N-terminus compared to isoform a. Variants 5 and 6 both encode the same isoform (d).
      Source sequence(s)
      AC104564
    6. NM_138349.4NP_612358.3  tumor protein p53-inducible protein 13 isoform a precursor

      See identical proteins and their annotated locations for NP_612358.3

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (a).
      Source sequence(s)
      AL551604, BC001593
      Consensus CDS
      CCDS42289.1
      UniProtKB/Swiss-Prot
      Q8NBR0
      Related
      ENSP00000301057.7, ENST00000301057.8

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      29567180..29573157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024451016.1XP_024306784.1  tumor protein p53-inducible protein 13 isoform X1

    2. XM_024451018.1XP_024306786.1  tumor protein p53-inducible protein 13 isoform X2

    3. XM_024451017.1XP_024306785.1  tumor protein p53-inducible protein 13 isoform X1

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