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    SMIM3 small integral membrane protein 3 [ Homo sapiens (human) ]

    Gene ID: 85027, updated on 17-Jun-2019

    Summary

    Official Symbol
    SMIM3provided by HGNC
    Official Full Name
    small integral membrane protein 3provided by HGNC
    Primary source
    HGNC:HGNC:30248
    See related
    Ensembl:ENSG00000256235 MIM:608324
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NID67; MST150; C5orf62
    Expression
    Broad expression in fat (RPKM 64.3), bone marrow (RPKM 21.5) and 18 other tissues See more
    Orthologs

    Genomic context

    See SMIM3 in Genome Data Viewer
    Location:
    5q33.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (150777946..150796736)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (150157508..150176298)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 22 Neighboring gene dynactin subunit 4 Neighboring gene immunity related GTPase M Neighboring gene zinc finger protein 300 Neighboring gene zinc finger protein 300 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC117221, MGC126887, MGC126889

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small integral membrane protein 3
    Names
    NGF-induced differentiation clone 67 protein
    Uncharacterized protein C5orf62
    small membrane protein NID67

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_032947.4NP_116565.3  small integral membrane protein 3

      See identical proteins and their annotated locations for NP_116565.3

      Status: VALIDATED

      Source sequence(s)
      AC010441, AK125286, BC009719, BC106040
      Consensus CDS
      CCDS47312.2
      UniProtKB/Swiss-Prot
      Q9BZL3
      Related
      ENSP00000436897.1, ENST00000526627.1
      Conserved Domains (1) summary
      pfam17307
      Location:160
      Smim3; Small integral membrane protein 3

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

      Range
      150777946..150796736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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