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    MAK16 MAK16 homolog [ Homo sapiens (human) ]

    Gene ID: 84549, updated on 17-Jun-2019

    Summary

    Official Symbol
    MAK16provided by HGNC
    Official Full Name
    MAK16 homologprovided by HGNC
    Primary source
    HGNC:HGNC:13703
    See related
    Ensembl:ENSG00000198042
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    RBM13; MAK16L
    Expression
    Ubiquitous expression in lymph node (RPKM 5.6), appendix (RPKM 5.5) and 25 other tissues See more
    Orthologs

    Genomic context

    See MAK16 in Genome Data Viewer
    Location:
    8p12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (33485182..33501262)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (33342685..33358778)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 10 Neighboring gene RNA, U6 small nuclear 528, pseudogene Neighboring gene RNA binding motif protein 4 pseudogene Neighboring gene thymosin beta 4 X-linked pseudogene Neighboring gene TELO2 interacting protein 2 Neighboring gene small nucleolar RNA, C/D box 13

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    RNA binding HDA PubMed 
    Component Evidence Code Pubs
    intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
     
    nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleolus IDA
    Inferred from Direct Assay
    more info
     
    preribosome, large subunit precursor IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    protein MAK16 homolog
    Names
    NNP78
    RNA binding motif protein 13
    RNA binding protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_032509.4NP_115898.2  protein MAK16 homolog

      See identical proteins and their annotated locations for NP_115898.2

      Status: VALIDATED

      Source sequence(s)
      AC091144, BC039740, BC050528, BP281245
      Consensus CDS
      CCDS6089.1
      UniProtKB/Swiss-Prot
      Q9BXY0
      Related
      ENSP00000353246.5, ENST00000360128.11
      Conserved Domains (1) summary
      PLN00040
      Location:1196
      PLN00040; Protein MAK16 homolog; Provisional

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

      Range
      33485182..33501262
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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