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    FAM167A-AS1 FAM167A antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 83656, updated on 15-Jun-2019

    Summary

    Official Symbol
    FAM167A-AS1provided by HGNC
    Official Full Name
    FAM167A antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:15548
    See related
    Ensembl:ENSG00000184608
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C8orf12
    Expression
    Low expression observed in reference dataset See more

    Genomic context

    See FAM167A-AS1 in Genome Data Viewer
    Location:
    8p23.1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 8 NC_000008.11 (11368402..11438657)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (11225911..11296166)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100129129 Neighboring gene solute carrier family 35 member G5 Neighboring gene L-threonine dehydrogenase (pseudogene) Neighboring gene RNA, 7SL, cytoplasmic 293, pseudogene Neighboring gene RNA, U6 small nuclear 1084, pseudogene Neighboring gene family with sequence similarity 167 member A Neighboring gene BLK proto-oncogene, Src family tyrosine kinase Neighboring gene uncharacterized LOC105379241 Neighboring gene long intergenic non-protein coding RNA 208

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    NHGRI GWAS Catalog

    Description
    Common genetic variation and performance on standardized cognitive tests.
    NHGRI GWA Catalog

    General gene information

    Markers

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026814.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AJ301563
      Related
      ENST00000533578.4

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

      Range
      11368402..11438657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 PATCHES

    Genomic

    1. NW_018654717.1 Reference GRCh38.p13 PATCHES

      Range
      1909911..1978449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_054017.2: Suppressed sequence

      Description
      NM_054017.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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