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    FAM86DP family with sequence similarity 86 member D, pseudogene [ Homo sapiens (human) ]

    Gene ID: 692099, updated on 17-Jun-2019

    Summary

    Official Symbol
    FAM86DPprovided by HGNC
    Official Full Name
    family with sequence similarity 86 member D, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:32659
    See related
    Ensembl:ENSG00000244026
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FAM86D
    Expression
    Ubiquitous expression in ovary (RPKM 4.4), endometrium (RPKM 3.2) and 25 other tissues See more

    Genomic context

    See FAM86DP in Genome Data Viewer
    Location:
    3p12.3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (75421552..75435115, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (75470703..75484266, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 7 subfamily E member 55 pseudogene Neighboring gene LSP1 pseudogene 2 Neighboring gene ALG1 like 6, pseudogene Neighboring gene Sharpr-MPRA regulatory region 2645 Neighboring gene long intergenic non-protein coding RNA 2018 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2 Neighboring gene small nuclear ribonucleoprotein polypeptide C pseudogene 10

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024241.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC139453, BC016686, BC068011, DA753838
      Related
      ENST00000459803.5

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

      Range
      75421552..75435115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 PATCHES

    Genomic

    1. NW_021159989.1 Reference GRCh38.p13 PATCHES

      Range
      68199..81762 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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