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    SCARNA3 small Cajal body-specific RNA 3 [ Homo sapiens (human) ]

    Gene ID: 677679, updated on 17-Jun-2019

    Summary

    Official Symbol
    SCARNA3provided by HGNC
    Official Full Name
    small Cajal body-specific RNA 3provided by HGNC
    Primary source
    HGNC:HGNC:32577
    See related
    Ensembl:ENSG00000252906
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    HBI-100

    Genomic context

    See SCARNA3 in Genome Data Viewer
    Location:
    1q25.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (175968397..175968540, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (175937533..175937676, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2803 Neighboring gene long intergenic non-protein coding RNA 1657 Neighboring gene ribosomal protein S29 pseudogene 5 Neighboring gene COP1 E3 ubiquitin ligase Neighboring gene microRNA 1843 Neighboring gene RNA, U2 small nuclear 12, pseudogene Neighboring gene ribosomal protein L13 pseudogene 7

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Cajal body IEA
    Inferred from Electronic Annotation
    more info
     
    nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002998.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BK000438
      Related
      ENST00000517097.1

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

      Range
      175968397..175968540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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