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    LOC653712 intraflagellar transport 122 homolog (Chlamydomonas) pseudogene [ Homo sapiens (human) ]

    Gene ID: 653712, updated on 17-Jun-2019

    Summary

    Gene symbol
    LOC653712
    Gene description
    intraflagellar transport 122 homolog (Chlamydomonas) pseudogene
    See related
    Ensembl:ENSG00000231305
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 9.2), thyroid (RPKM 1.3) and 13 other tissues See more

    Genomic context

    See LOC653712 in Genome Data Viewer
    Location:
    3q21.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (128861508..128871541, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (128580351..128590384, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene microtubule affinity regulating kinase 3 pseudogene 3 Neighboring gene microtubule affinity regulating kinase 2 pseudogene 6 Neighboring gene acyl-CoA dehydrogenase family member 9 Neighboring gene KIAA1257 Neighboring gene EF-hand and coiled-coil domain containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_034179.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC112484, BX281830, DY655503
      Related
      ENST00000498297.1

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

      Range
      128861508..128871541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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