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    ADAMTSL4-AS1 ADAMTSL4 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 574406, updated on 17-Jun-2019

    Summary

    Official Symbol
    ADAMTSL4-AS1provided by HGNC
    Official Full Name
    ADAMTSL4 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:32041
    See related
    Ensembl:ENSG00000203804
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C1orf138
    Expression
    Biased expression in placenta (RPKM 48.0), lung (RPKM 13.9) and 12 other tissues See more

    Genomic context

    See ADAMTSL4-AS1 in Genome Data Viewer
    Location:
    1q21.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (150560895..150574552, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene focally amplified long non-coding RNA in epithelial cancer Neighboring gene uncharacterized LOC100289061 Neighboring gene ADAMTS like 4 Neighboring gene microRNA 4257 Neighboring gene RNA, 7SL, cytoplasmic 473, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 600, pseudogene Neighboring gene Sharpr-MPRA regulatory region 9 Neighboring gene uncharacterized LOC107985203 Neighboring gene MCL1 apoptosis regulator, BCL2 family member

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_000001.11 Chromosome 1 Reference GRCh38.p13 Primary Assembly

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_104133.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL356356
      Related
      ENST00000617352.1

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

      Range
      150560895..150574552 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001025493.1: Suppressed sequence

      Description
      NM_001025493.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
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