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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001300739.2 → NP_001287668.1 protein mago nashi homolog 2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' structure and initiates translation at a downstream start codon compared to variant 1. The encoded isoform (2) has a shorter N-terminus compared to isoform 1. Variants 2 and 3 encode the same isoform (2).
- Source sequence(s)
-
AC021049, BG497574, BU933036, DB340467
- Consensus CDS
-
CCDS76532.1
- UniProtKB/TrEMBL
-
F5H6P7
- Conserved Domains (1) summary
-
- cl03715
Location:1 → 102
- Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
-
NM_001319985.2 → NP_001306914.1 protein mago nashi homolog 2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' region and initiates translation at a downstream start codon compared to variant 1. The encoded isoform (2) has a shorter N-terminus compared to isoform 1. Variants 2 and 3 encode the same isoform (2).
- Source sequence(s)
-
AC021049, AF165518, BF667243, BG533740, CD357202
- Consensus CDS
-
CCDS76532.1
- UniProtKB/TrEMBL
-
F5H6P7
- Related
- ENSP00000437462.1, ENST00000539554.5
- Conserved Domains (1) summary
-
- cl03715
Location:1 → 102
- Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
-
NM_018048.5 → NP_060518.1 protein mago nashi homolog 2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC021049, AF165518, BG533740, CD357202
- Consensus CDS
-
CCDS8628.1
- UniProtKB/Swiss-Prot
-
Q96A72
- UniProtKB/TrEMBL
-
A0A023T6R1
- Related
- ENSP00000319240.2, ENST00000320756.7
- Conserved Domains (1) summary
-
- cd11295
Location:6 → 148
- Mago_nashi; Mago nashi proteins, integral members of the exon junction complex
RNA
-
NR_135120.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) contains an alternate internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC021049, BC000928, BG533740, CD357202
-
NR_135121.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate splice site in the 5' region and contains an alternate internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC021049, BC000928, BG533740, BG539870
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
10599524..10613609 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047429058.1 → XP_047285014.1 protein mago nashi homolog 2 isoform X1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
10472850..10486915 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372386.1 → XP_054228361.1 protein mago nashi homolog 2 isoform X1