Format

Send to:

Choose Destination
    • Showing Current items.

    HERC2P9 hect domain and RLD 2 pseudogene 9 [ Homo sapiens (human) ]

    Gene ID: 440248, updated on 13-Feb-2019

    Summary

    Official Symbol
    HERC2P9provided by HGNC
    Official Full Name
    hect domain and RLD 2 pseudogene 9provided by HGNC
    Primary source
    HGNC:HGNC:30495
    See related
    Ensembl:ENSG00000206149
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in urinary bladder (RPKM 20.7), brain (RPKM 19.3) and 25 other tissues See more

    Genomic context

    See HERC2P9 in Genome Data Viewer
    Location:
    15q13.1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 15 NC_000015.10 (28654442..28685264)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (28899588..28930410)

    Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene pectinesterase inhibitor 10-like Neighboring gene hect domain and RLD 2 pseudogene 11 Neighboring gene HECT and RLD domain containing E3 ubiquitin protein ligase 2 pseudogene Neighboring gene uncharacterized LOC107984746 Neighboring gene RNA, 7SL, cytoplasmic 719, pseudogene Neighboring gene golgin A8 family member M Neighboring gene WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ59185

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036443.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      BC047911
      Related
      ENST00000528584.5

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p12 Primary Assembly

    Genomic

    1. NC_000015.10 Reference GRCh38.p12 Primary Assembly

      Range
      28654442..28685264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p12 PATCHES

    Genomic

    1. NW_011332701.1 Reference GRCh38.p12 PATCHES

      Range
      816447..847268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p12 ALT_REF_LOCI_2

    Genomic

    1. NT_187660.1 Reference GRCh38.p12 ALT_REF_LOCI_2

      Range
      930233..961054
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_006524.1: Suppressed sequence

      Description
      NG_006524.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
    2. NG_025368.1: Suppressed sequence

      Description
      NG_025368.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
    3. NM_199045.1: Suppressed sequence

      Description
      NM_199045.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
    Support Center