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    LINC01185 long intergenic non-protein coding RNA 1185 [ Homo sapiens (human) ]

    Gene ID: 400957, updated on 17-Jun-2019

    Summary

    Official Symbol
    LINC01185provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1185provided by HGNC
    Primary source
    HGNC:HGNC:49572
    See related
    Ensembl:ENSG00000228414
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more

    Genomic context

    See LINC01185 in Genome Data Viewer
    Location:
    2p16.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (60847760..60881314, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (61074895..61108449, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene poly(A) polymerase gamma Neighboring gene RNA, 7SL, cytoplasmic 632, pseudogene Neighboring gene ribosomal protein L21 pseudogene 33 Neighboring gene REL proto-oncogene, NF-kB subunit Neighboring gene RNA, U4 small nuclear 51, pseudogene Neighboring gene non-POU domain containing, octamer-binding pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Phenotypes

    NHGRI GWAS Catalog

    Description
    A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1.
    NHGRI GWA Catalog
    Genome-wide association analysis identifies three psoriasis susceptibility loci.
    NHGRI GWA Catalog
    Genome-wide meta-analysis of psoriatic arthritis identifies susceptibility locus at REL.
    NHGRI GWA Catalog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033980.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010733, AK122786
      Related
      ENST00000452343.1

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

      Range
      60847760..60881314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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