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    C17orf98 chromosome 17 open reading frame 98 [ Homo sapiens (human) ]

    Gene ID: 388381, updated on 17-Jun-2019

    Summary

    Official Symbol
    C17orf98provided by HGNC
    Official Full Name
    chromosome 17 open reading frame 98provided by HGNC
    Primary source
    HGNC:HGNC:34492
    See related
    Ensembl:ENSG00000275489
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 5.5) See more
    Orthologs

    Genomic context

    See C17orf98 in Genome Data Viewer
    Location:
    17q12
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (38835088..38841389, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (36991341..36997642, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene CWC25 spliceosome associated protein homolog Neighboring gene microRNA 4727 Neighboring gene ribosomal protein L23 Neighboring gene small nucleolar RNA, H/ACA box 21B Neighboring gene small nucleolar RNA, H/ACA box 21

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    uncharacterized protein C17orf98

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080465.2NP_001073934.1  uncharacterized protein C17orf98

      See identical proteins and their annotated locations for NP_001073934.1

      Status: VALIDATED

      Source sequence(s)
      AC006449, AW182930, DY654789
      Consensus CDS
      CCDS42310.1
      UniProtKB/Swiss-Prot
      A8MV24
      Related
      ENSP00000479396.1, ENST00000614158.1
      Conserved Domains (1) summary
      pfam15075
      Location:12143
      DUF4542; Domain of unknown function (DUF4542)

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      38835088..38841389 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 ALT_REF_LOCI_1

    Genomic

    1. NT_187614.1 Reference GRCh38.p13 ALT_REF_LOCI_1

      Range
      2870407..2876708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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