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    DMBT1P1 deleted in malignant brain tumors 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 375940, updated on 15-Jun-2019

    Summary

    Official Symbol
    DMBT1P1provided by HGNC
    Official Full Name
    deleted in malignant brain tumors 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:49497
    See related
    Ensembl:ENSG00000176584
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
    Orthologs

    Genomic context

    See DMBT1P1 in Genome Data Viewer
    Location:
    10q26.13
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 10 NC_000010.11 (122756694..122797645)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (124516210..124557161)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene deleted in malignant brain tumors 1 Neighboring gene chromosome 10 open reading frame 120 Neighboring gene FAM24B-CUZD1 readthrough Neighboring gene CUB and zona pellucida like domains 1 Neighboring gene family with sequence similarity 24 member B Neighboring gene chromosome 10 open reading frame 88 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Other Names

    • ZP domain-containing protein LOC729800-like
    • putative ZP domain-containing protein LOC729800

    Clone Names

    • FLJ46361

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003570.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AK128228, AL731543
      Related
      ENST00000439464.6

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

      Range
      122756694..122797645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_005514.1: Suppressed sequence

      Description
      NG_005514.1: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
    2. NG_025545.1: Suppressed sequence

      Description
      NG_025545.1: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
    3. NM_198577.1: Suppressed sequence

      Description
      NM_198577.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
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