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    GAPDH glyceraldehyde-3-phosphate dehydrogenase [ Gallus gallus (chicken) ]

    Gene ID: 374193, updated on 14-Apr-2019

    Summary

    Official Symbol
    GAPDHprovided by CGNC
    Official Full Name
    glyceraldehyde-3-phosphate dehydrogenaseprovided by CGNC
    Primary source
    CGNC:49077
    See related
    Ensembl:ENSGALG00000014442
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    KNC-NDS6
    Orthologs

    Genomic context

    See GAPDH in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (77619440..77623355)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (76952888..76956805)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (76433608..76437500)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U85 Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene C-type natriuretic peptide 1 Neighboring gene intermediate filament family orphan 1 Neighboring gene NOP2 nucleolar protein Neighboring gene chromodomain helicase DNA binding protein 4

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    NAD binding IEA
    Inferred from Electronic Annotation
    more info
     
    NADP binding IEA
    Inferred from Electronic Annotation
    more info
     
    aspartic-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    disordered domain specific binding IEA
    Inferred from Electronic Annotation
    more info
     
    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    peptidyl-cysteine S-nitrosylase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    antimicrobial humoral immune response mediated by antimicrobial peptide IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to interferon-gamma IEA
    Inferred from Electronic Annotation
    more info
     
    defense response to fungus IEA
    Inferred from Electronic Annotation
    more info
     
    gluconeogenesis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    gluconeogenesis TAS
    Traceable Author Statement
    more info
     
    glycolytic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    glycolytic process IEA
    Inferred from Electronic Annotation
    more info
     
    glycolytic process NAS
    Non-traceable Author Statement
    more info
    PubMed 
    glycolytic process TAS
    Traceable Author Statement
    more info
     
    killing by host of symbiont cells IEA
    Inferred from Electronic Annotation
    more info
     
    microtubule cytoskeleton organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    negative regulation of apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    neuron apoptotic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nuclear membrane fusion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    peptidyl-cysteine S-trans-nitrosylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    positive regulation by organism of apoptotic process in other organism involved in symbiotic interaction IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cytokine secretion IEA
    Inferred from Electronic Annotation
    more info
     
    protein stabilization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    GAIT complex IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    lipid droplet IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    microtubule cytoskeleton ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    glyceraldehyde-3-phosphate dehydrogenase
    Names
    peptidyl-cysteine S-nitrosylase GAPDH
    NP_989636.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204305.1NP_989636.1  glyceraldehyde-3-phosphate dehydrogenase

      See identical proteins and their annotated locations for NP_989636.1

      Status: PROVISIONAL

      Source sequence(s)
      AF047874
      UniProtKB/Swiss-Prot
      P00356
      UniProtKB/TrEMBL
      F1NH87
      Related
      ENSGALP00000023278.4, ENSGALT00000023323.6
      Conserved Domains (1) summary
      cl27764
      Location:2330
      Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      77619440..77623355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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