U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    H3c10 H3 clustered histone 10 [ Mus musculus (house mouse) ]

    Gene ID: 319152, updated on 8-Feb-2024

    Summary

    Official Symbol
    H3c10provided by MGI
    Official Full Name
    H3 clustered histone 10provided by MGI
    Primary source
    MGI:MGI:2448349
    See related
    Ensembl:ENSMUSG00000101355 AllianceGenome:MGI:2448349
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H3c1; H3c8; H3c11; H3-291; Hist1h3h
    Summary
    Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H3 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. [provided by RefSeq, Aug 2015]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See H3c10 in Genome Data Viewer
    Location:
    13 A3.1; 13 7.94 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (21901798..21902285)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21717628..21718115)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer mm9_chr13:21808027-21808328 Neighboring gene H2B clustered histone 13 Neighboring gene H2A clustered histone 13 Neighboring gene STARR-positive B cell enhancer mm9_chr13:21809194-21809494 Neighboring gene H2A clustered histone 14, pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E261 Neighboring gene H2B clustered histone 14

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    part_of nucleosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    histone H3.1
    Names
    histone 1, H3h
    histone cluster 1, H3h

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178206.2NP_835513.1  histone H3.1

      See identical proteins and their annotated locations for NP_835513.1

      Status: REVIEWED

      Source sequence(s)
      AL589651
      Consensus CDS
      CCDS26289.1
      UniProtKB/Swiss-Prot
      P68433, Q05A97, Q3B7Z8, Q3B7Z9, Q5T009
      UniProtKB/TrEMBL
      A1L0V4
      Related
      ENSMUSP00000140394.2, ENSMUST00000188775.2
      Conserved Domains (1) summary
      PTZ00018
      Location:1136
      PTZ00018; histone H3; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      21901798..21902285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)